Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015872844.1_cds_XP_016434908.1_30922
CDS Infomation

[gene=LOC107761227] [db_xref=GeneID:107761227] [protein=histone-lysine N-methyltransferase ASHH2-like] [partial=3'] [protein_id=XP_016434908.1] [location=complement(join(<18..110,1050..1166,1253..1384,3137..3216,3326..3492,4844..5051,5161..6367))] [gbkey=CDS]
Sequence

ATGGTGCAAGCTGTTGAGCACAACAGCGCACTCGAGATAGCTCAAAGTGAGCACATAAAA
TCAAAAACAACAAAGAATGGTCAGGAAAAGGAGAAGCAGGGTAAGAATCACACTGGTCAA
AACTCGCGGAAATCAAAGGGAAAAATCTCCATTCCTACAGGCCCCATCACCTTGAAAGTT
AAATTTGGTTCACGTTGCCTGATGGATATTGTTCCTCTTATTGATGATCACACTGACAAA
CAGTGCACTATGGGAAAAGAGCTCAATGGATCGTCAAATGTTGCCAGGAATTTTGATGAT
CAGCTGAAGGGAGAGTTGCCCAGTCGGCAGTTCGGCAGGTGCAATGGGAATTTGGATAAT
GTGTATGTTTCTGTATCAGACATATGCCAATCAGGAAAGAAGATCAATCAAAATCCAGCG
GACAAACTCTTGGACTTTCACAATGACTCATTTTCTGAGGAGGGGACATCAATTGATAAC
AGGTGCTCAGATGCTGGAACTTCACCTGACTCAGAAGTTATCAACCTGGTTCCGGATGCT
CAAATAAATGAGAGAGGCCGAGAAGAGTTGAATGATTTAATTATGCCTAAGCCATCTGTT
GCTCCTGGTGATGTTCTGAGTTTGCGTGTGTATGGCAGGAGCAAGAAAGGAAGGAAAAAA
GATAGTCTCCCAAAGTTAGCCAGTTCTGGTGTGAAGGATCTGCTTAGTCCAGATAGTATG
AGCAGTTCTCAAATATTTGGGCAACTCATCCAAGGAGAAAAAGTACAAGGGGGATCTTGT
TGTTCTGATACTTCTGCTCTGACACCAGGGCGGATTGGCTTAGGCAACATATCGAGCACT
GAGATTGTTTCAGGAGAACTGTTACCTTGTTCAGGAGTGTCAGACTTAACTATCTCCTGT
GCTACTTCAAAGTCTGAAAGTGGCATAGATGGTAATATTTGCTCTAGCCTTGGTACCGTG
TCACCAGAGACTGAGTTGTCTGAGAAAAAAGTATCCTCTCATGATGGACAAAATGTTCCC
AAAGGTGAAAGATCAGATGTATCTGGCAAAGGCCTGTCACAAGTCCCGAACCCGAAGTCA
TCCAAAAGTAGAGGAAGTGCTTCTAAAAAGAAGGGAAACAAAGAAAAACAAGATAATAAG
CTTGAAGTGAAACATGAGAGTGACCATGTCACGAGTTTATGTGAGGTGAAACACCACCAA
GAAACAGAAAACGAAGCACCATACGGGTTTGGAGAAGTTGGATCGAGATATAAAACCTTA
AATGGAGGCATTTCAGACTTGGACATTACACGGGGTGTGGTGAGTCAGCCTCGTTTTCAA
CCAAGAAATGCCTGGGTGCAGTGTGATGATTGCCTGAAGTGGAGACGTATAGCTTCCGAA
CTTGCTGATCAAATTGATGAAACAAACTGCAAATGGACTTGTAAGGATAACTTGGATAGA
AACTTTGCTGATTGCTCGATTGCACAAGAAAAATCAAATTCAGAAATTAATGCTGAGCTG
GAAATATCGGATGCCTCTGGTGAGGAAGATGCCCTCAGTAGACGCTTGAATTCAAATCAA
TCAGGACAGAAGAAGGCACTTGTTGCCCATCAATCATCTTGGACTCTGATCAGGAGAAAC
TTATTCCTGCATCGTAGCCGCAAAAGTCAAACTATTGATGAGATCATGGTCTGCCATTGC
AACCCTCCTTCACATGGCCGAATGGGCTGCGGAGATGGATGCCTGAATCGGATGCTCAAC
GTTGAGTGTGTTCGAGGGTCTTGTCCATGTGGAGAGCGCTGTTCGAATCAGCAGTTTCAG
AAGCGTAAGTATGCTAAATTGAAGTGCTTCAAATGTGGAAAGAAGGGTTATGGCCTGCAG
CTGCTTGAGGATGTCTCCGAAGGGCAGTTTCTTATAGAATATGTTGGGGAGGTCCTGGAT
CTGCATGCGCACGAGGCAAGACAAAAGGAGTATGCCCTGAAGGGTCATAAGCATTTTTAC
TTTATGACACTTAATGGCAGTGAG

Peptide Sequence

PEP ID

XP_016434908.1
PEP Infomation

PREDICTED: histone-lysine N-methyltransferase ASHH2-like, partial [Nicotiana tabacum]
Sequence

MVQAVEHNSALEIAQSEHIKSKTTKNGQEKEKQGKNHTGQNSRKSKGKISIPTGPITLKV
KFGSRCLMDIVPLIDDHTDKQCTMGKELNGSSNVARNFDDQLKGELPSRQFGRCNGNLDN
VYVSVSDICQSGKKINQNPADKLLDFHNDSFSEEGTSIDNRCSDAGTSPDSEVINLVPDA
QINERGREELNDLIMPKPSVAPGDVLSLRVYGRSKKGRKKDSLPKLASSGVKDLLSPDSM
SSSQIFGQLIQGEKVQGGSCCSDTSALTPGRIGLGNISSTEIVSGELLPCSGVSDLTISC
ATSKSESGIDGNICSSLGTVSPETELSEKKVSSHDGQNVPKGERSDVSGKGLSQVPNPKS
SKSRGSASKKKGNKEKQDNKLEVKHESDHVTSLCEVKHHQETENEAPYGFGEVGSRYKTL
NGGISDLDITRGVVSQPRFQPRNAWVQCDDCLKWRRIASELADQIDETNCKWTCKDNLDR
NFADCSIAQEKSNSEINAELEISDASGEEDALSRRLNSNQSGQKKALVAHQSSWTLIRRN
LFLHRSRKSQTIDEIMVCHCNPPSHGRMGCGDGCLNRMLNVECVRGSCPCGERCSNQQFQ
KRKYAKLKCFKCGKKGYGLQLLEDVSEGQFLIEYVGEVLDLHAHEARQKEYALKGHKHFY
FMTLNGSE

Transcript Sequence

Gene sequence data has not been registered.